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Vegh P, Magee DA, Nalpas NC, Bryan K, McCabe MS, Browne JA, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ. MicroRNA profiling of the bovine alveolar macrophage response to Mycobacterium bovis infection suggests pathogen survival is enhanced by microRNA regulation of endocytosis and lysosome trafficking. Tuberculosis (Edinb). 2015 Jan;95(1):60-7. PMID:25692199.

McLaughlin RL, Kenna KP, Vajda A, Heverin M, Byrne S, Donaghy CG, Cronin S, Bradley DG, Hardiman O Homozygosity mapping in an Irish ALS case–control cohort describes local demographic phenomena and points towards potential recessive risk loci Genomics. 2015 Jan 23. [Epub ahead of print] doi: 10.1016/j.ygeno.2015.01.002.

M. D. Teasdale, N. L. van Doorn, S. Fiddyment, C. C. Webb, T. O'Connor, M. Hofreiter, M. J. Collins, D. G. Bradley Paging through history: parchment as a reservoir of ancient DNA for next generation sequencing Phil. Trans. R. Soc., Dec 2014 B 370: 20130379 DOI: 10.1098/rstb.2013.0379
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Ian W Richardson, Dan G Bradley, Isabella M Higgins, Simon J More, Jennifer McClure and Donagh P Berry Variance components for susceptibility to Mycobacterium bovis infection in dairy and beef cattle Genetics Selection Evolution 2014, 46:77 doi:10.1186/s12711-014-0077-1

Sanderson ND, Norman PJ, Guethlein LA, Ellis SA, Williams C, Breen M, Park SD, Magee DA, Babrzadeh F, Warry A, Watson M, Bradley DG, MacHugh DE, Parham P, Hammond JA Definition of the Cattle Killer Cell Ig-like Receptor Gene Family: Comparison with Aurochs and Human Counterparts J Immunol. 2014 Nov 14. pii: 1401980 PMID:25398326

Cristina Gamba, Eppie R. Jones, Matthew D. Teasdale, Russell L. McLaughlin, Gloria Gonzalez-Fortes, Valeria Mattiangeli, László Domboróczki, Ivett K?vári, Ildikó Pap, Alexandra Anders, Alasdair Whittle, János Dani, Pál Raczky, Thomas F. G. Higham, Michael Hofreiter, Daniel G. Bradley, Ron Pinhasi Genome flux and stasis in a five millennium transect of European prehistory Nature Communications October 2014 PMID:25334030
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McLaughlin RL, Kenna KP, Vajda A, Bede P, Elamin M, Cronin S, Donaghy CG, Bradley DG, Hardiman O. A second-generation Irish genome-wide association study for amyotrophic lateral sclerosis. Neurobiol Aging 2014 Sept. DOI:10.1016/j.neurobiolaging.2014.08.030.

Martiniano R, Coelho C, Ferreira MT, Neves MJ, Pinhasi R, Bradley DG. Genetic Evidence of African Slavery at the Beginning of the Trans-Atlantic Slave Trade. Sci Rep. 2014 Aug 8;4:5994. PMID:25104065

Bede P, Elamin M, Byrne S, McLaughlin RL, Kenna K, Vajda A, Fagan A, Bradley DG, Hardiman O Patterns of cerebral and cerebellar white matter degeneration in ALS J Neurol Neurosurg Psychiatry. 2014 Jul 21. pii: jnnp-2014-308172. PMID:25053771

Gerbault P, Allaby RG, Boivin N, Rudzinski A, Grimaldi IM, Pires JC, Climer Vigueira C, Dobney K, Gremillion KJ, Barton L, Arroyo-Kalin M, Purugganan MD, Rubio de Casas R, Bollongino R, Burger J, Fuller DQ, Bradley DG, Balding DJ, Richerson PJ, Gilbert MT, Larson G, Thomas MG. Storytelling and story testing in domestication. Proc Natl Acad Sci U S A. 2014 Apr 29;111(17):6159-64. PMID:24753572

Larson G, Bradley DG. How much is that in dog years? The advent of canine population genomics. PLoS Genet. 2014 Jan;10(1) PMID:24453989


Fahey C, Byrne S, McLaughlin R, Kenna K, Shatunov A, Donohoe G, Gill M, Al-Chalabi A, Bradley DG, Hardiman O, Corvin AP, Morris DW. Analysis of the hexanucleotide repeat expansion and founder haplotype at C9ORF72 in an Irish psychosis case-control sample. Neurobiol Aging. 2013 Dec 12. [Epub ahead of print] PMID:24411481

Purfield DC, Bradley DG, Kearney JF, Berry DP. Genome-wide association study for calving traits in Holstein-Friesian dairy cattle. Animal. 2013 Nov 20:1-12. [Epub ahead of print] PMID:24256561

Meredith BK, Berry DP, Kearney F, Finlay EK, Fahey AG, Bradley DG, Lynn DJ. A genome-wide association study for somatic cell score using the Illumina high-density bovine beadchip identifies several novel QTL potentially related to mastitis susceptibility. Front Genet. 2013 Nov 6;4:229. doi: 10.3389/fgene.2013.00229. PMID:24223582

Bede P, Elamin M, Byrne S, McLaughlin RL, Kenna K, Vajda A, Pender N, Bradley DG, Hardiman O. Basal ganglia involvement in amyotrophic lateral sclerosis. Neurology. 2013 Nov 8. [Epub ahead of print] PMID:24212388

Zhang H, Paijmans JL, Chang F, Wu X, Chen G, Lei C, Yang X, Wei Z, Bradley DG, Orlando L, O'Connor T, Hofreiter M. Morphological and genetic evidence for early Holocene cattle management in northeastern China. Nat Commun. 2013;4:2755. doi: 10.1038/ncomms3755. PMID:24202175

Edwards CJ, Soulsbury CD, Statham MJ, Ho SY, Wall D, Dolf G, Iossa G, Baker PJ, Harris S, Sacks BN, Bradley DG. Temporal genetic variation of the red fox, Vulpes vulpes, across western Europe and the British Isles. Quat Sci Rev. 2012 Dec 4;57(100):95-104. PMID:24068852

Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, Machugh DE, Lynn DJ. Profiling microRNA expression in bovine alveolar macrophages using RNA-seq. Vet Immunol Immunopathol. 2013 Oct 1;155(4):238-44. doi: 10.1016/j.vetimm.2013.08.004. Epub 2013 Aug 24. PMID:24021155

McLaughlin RL, Kenna KP, Vajda A, Byrne S, Bradley DG, Hardiman O. UBQLN2 mutations are not a frequent cause of amyotrophic lateral sclerosis in Ireland. Neurobiol Aging. 2013 Aug 21. doi:pii: S0197-4580(13)00328-X. 10.1016/j.neurobiolaging.2013.07.023. PMID:23973441

Kenna KP, McLaughlin RL, Byrne S, Elamin M, Heverin M, Kenny EM, Cormican P, Morris DW, Donaghy CG, Bradley DG, Hardiman O. Delineating the genetic heterogeneity of ALS using targeted high-throughput sequencing. J Med Genet. 2013 Jul 23. doi: 10.1136/jmedgenet-2013-101795. PMID:23881933

Bede P, Bokde AL, Byrne S, Elamin M, McLaughlin RL, Kenna K, Fagan AJ, Pender N, Bradley DG, Hardiman O Multiparametric MRI study of ALS stratified for the C9orf72 genotype. Neurology. 2013 Jul 23;81(4):361-9. doi 10.1212/WNL.0b013e31829c5eee. PMID:23771489

Connell S, Meade KG, Allan B, Lloyd AT, Downing T, O'Farrelly C, Bradley DG. Genome-Wide Association Analysis of Avian Resistance to Campylobacter jejuni Colonization Identifies Risk Locus Spanning the CDH13 Gene. G3 (Bethesda). 2013 Mar 27. doi:pii: g3.113.006031v1. 10.1534/g3.113.006031. PMID:23550144

Kenna KP, McLaughlin RL, Hardiman O, Bradley DG. Using Reference Databases of Genetic Variation to Evaluate the Potential Pathogenicity of Candidate Disease Variants. Hum Mutat. 2013 Feb 27. doi: 10.1002/humu.22303. PMID:23447461


le Roex N, Noyes H, Brass A, Bradley DG, Kemp SJ, Kay S, van Helden PD, Hoal EG. Novel SNP Discovery in African Buffalo, Syncerus caffer, using high-throughput Sequencing. PLoS One. 2012;7(11):e48792. doi: 10.1371/journal.pone.0048792. Epub 2012 Nov 7. PMID:23144973

Purfield DC, Berry DP, McParland S, Bradley DG. Runs of homozygosity and population history in cattle. BMC Genet. 2012 Aug 14;13(1):70. [Epub ahead of print] PMID:22888858

Connell S, Meade KG, Allan B, Lloyd AT, Kenny E, Cormican P, Morris DW, Bradley DG, O'Farrelly C. Avian Resistance to Campylobacter jejuni Colonization Is Associated with an Intestinal Immunogene Expression Signature Identified by mRNA Sequencing. PLoS One. 2012;7(8):e40409. Epub 2012 Aug 1. PMID:22870198

Hall SJ, Lenstra JA, Deeming DC; European Cattle Genetic Diversity Consortium. Prioritization based on neutral genetic diversity may fail to conserve important characteristics in cattle breeds. J Anim Breed Genet. 2012 Jun;129(3):218-25. doi: 10.1111/j.1439-0388.2011.00949.x. Epub 2011 Aug 15. PMID:22583326

Meredith BK, Kearney FJ, Finlay EK, Bradley DG, Fahey AG, Berry DP, Lynn DJ. Genome-wide associations for milk production and somatic cell score in Holstein-Friesian cattle in Ireland. BMC Genet. 2012 Mar 26;13(1):21. PMID:22449276

Finlay EK, Berry DP, Wickham B, Gormley EP, Bradley DG. A genome wide association scan of bovine tuberculosis susceptibility in Holstein-Friesian dairy cattle. PLoS One. 2012;7(2):e30545. Epub 2012 Feb 15. PMID:22355315

Byrne S, Elamin M, Bede P, Shatunov A, Walsh C, Corr B, Heverin M, Jordan N, Kenna K, Lynch C, McLaughlin RL, Iyer PM, O'Brien C, Phukan J, Wynne B, Bokde AL, Bradley DG, Pender N, Al-Chalabi A, Hardiman O. Cognitive and clinical characteristics of patients with amyotrophic lateral sclerosis carrying a C9orf72 repeat expansion: a population-based cohort study. Lancet Neurol. 2012 Mar;11(3):232-40. Epub 2012 Feb 3. PMID:22305801

Bower MA, McGivney BA, Campana MG, Gu J, Andersson LS, Barrett E, Davis CR, Mikko S, Stock F, Voronkova V, Bradley DG, Fahey AG, Lindgren G, MacHugh DE, Sulimova G, Hill EW. The genetic origin and history of speed in the Thoroughbred racehorse. Nat Commun. 2012 Jan 24;3:643. doi: 10.1038/ncomms1644. PMID:22273681


Busby GB, Brisighelli F, Sánchez-Diz P, Ramos-Luis E, Martinez-Cadenas C, Thomas MG, Bradley DG, Gusmăo L, Winney B, Bodmer W, Vennemann M, Coia V, Scarnicci F, Tofanelli S, Vona G, Ploski R, Vecchiotti C, Zemunik T, Rudan I, Karachanak S, Toncheva D, Anagnostou P, Ferri G, Rapone C, Hervig T, Moen T, Wilson JF, Capelli C. The peopling of Europe and the cautionary tale of Y chromosome lineage R-M269. Proc Biol Sci. 2011 Aug 24. [Epub ahead of print]. PMID:21865258 Direct link

Edwards CJ, Suchard MA, Lemey P, Welch JJ, Barnes I, Fulton TL, Barnett R, O'Connell TC, Coxon P, Monaghan N, Valdiosera CE, Lorenzen ED, Willerslev E, Baryshnikov GF, Rambaut A, Thomas MG, Bradley DG, Shapiro B. Ancient hybridization and an irish origin for the modern polar bear matriline. Curr Biol. 2011 Aug 9;21(15):1251-8. Epub 2011 Jul 7. PMID:21737280.

Noyes H, Brass A, Obara I, Anderson S, Archibald AL, Bradley DG, Fisher P, Freeman A, Gibson J, Gicheru M, Hall L, Hanotte O, Hulme H, McKeever D, Murray C, Oh SJ, Tate C, Smith K, Tapio M, Wambugu J, Williams DJ, Agaba M, Kemp SJ. Genetic and expression analysis of cattle identifies candidate genes in pathways responding to Trypanosoma congolense infection. Proc Natl Acad Sci U S A. 2011 May 31;108(22):9304-9. Epub 2011 May 18. PMID:21593421.

Edwards CJ, Ginja C, Kantanen J, Pérez-Pardal L, Tresset A, Stock F; European Cattle Genetic Diversity Consortium, Gama LT, Penedo MC, Bradley DG, Lenstra JA, Nijman IJ. Dual origins of dairy cattle farming--evidence from a comprehensive survey of European Y-chromosomal variation. PLoS One. 2011 Jan 6;6(1):e15922. PMID: 21253012.


McLaughlin RL, Phukan J, McCormack W, Lynch DS, Greenway M, Cronin S, Saunders J, Slowik A, Tomik B, Andersen PM, Bradley DG, Jakeman P, Hardiman O. Angiogenin levels and ANG genotypes: dysregulation in amyotrophic lateral sclerosis. PLoS One. 2010 Nov 10;5(11):e15402. PMID: 21085671.

Magee DA, Berkowicz EW, Sikora KM, Sweeney T, Kenny DA, Kelly AK, Evans RD, Wickham BW, Bradley DG, Spillane C, MacHugh DE. High concordance of bovine single nucleotide polymorphism genotypes generated using two independent genotyping strategies. Anim Biotechnol. 2010 Oct;21(4):257-62. PMID: 20967645.

Blauw HM, Al-Chalabi A, Andersen PM, van Vught PW, Diekstra FP, van Es MA, Saris CG, Groen EJ, van Rheenen W, Koppers M, Van't Slot R, Strengman E, Estrada K, Rivadeneira F, Hofman A, Uitterlinden AG, Kiemeney LA, Vermeulen SH, Birve A, Waibel S, Meyer T, Cronin S, McLaughlin RL, Hardiman O, Sapp PC, Tobin MD, Wain LV, Tomik B, Slowik A, Lemmens R, Rujescu D, Schulte C, Gasser T, Brown RH Jr, Landers JE, Robberecht W, Ludolph AC, Ophoff RA, Veldink JH, van den Berg LH. A large genome scan for rare CNVs in amyotrophic lateral sclerosis. Hum Mol Genet. 2010 Oct 15;19(20):4091-9. PMID: 20685689.

Tong P, Prendergast JG, Lohan AJ, Farrington SM, Cronin S, Friel N, Bradley DG, Hardiman O, Evans A, Wilson JF, Loftus B. Sequencing and analysis of an Irish human genome Genome Biol. 2010 Sep 7;11(9) PMID: 20822512.

Murray C, Huerta-Sanchez E, Casey F, Bradley DG. Cattle demographic history modelled from autosomal sequence variation. Philos Trans R Soc Lond B Biol Sci. 2010 Aug 27;365(1552):2531-9. PMID: 20643743.

Michael G. Campana, Mim A. Bower , Melanie J. Bailey , Frauke Stock , Tamsin C. O’Connell, Ceiridwen J. Edwards, Caroline Checkley-Scott, Barry Knight, Matthew Spencer,Christopher J. Howe A flock of sheep, goats and cattle: ancient DNA analysis reveals complexities of historical parchment manufacture. J. Arch. Sci. 2010. 37:1317-1325.

Downing T, Lloyd AT, O'Farrelly C, Bradley DG. The differential evolutionary dynamics of avian cytokine and TLR gene classes. J Immunol. 2010 Jun 15;184(12):6993-7000. PMID: 20483729

Groeneveld LF, Lenstra JA, Eding H, Toro MA, Scherf B, Pilling D, Negrini R, Finlay EK, Jianlin H, Groeneveld E, Weigend S; GLOBALDIV Consortium. Genetic diversity in farm animals--a review Anim Genet. 2010 May;41 Suppl 1:6-31. Review PMID: 20500753

Downing T, O'Farrelly C, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, Hanotte O, Bradley DG. Variation in chicken populations may affect the enzymatic activity of lysozyme. Anim Genet. 2010 Apr 1;41(2):213-7. PMID: 19845599

Edwards CJ, Magee DA, Park SD, McGettigan PA, Lohan AJ, Murphy A, Finlay EK, Shapiro B, Chamberlain AT, Richards MB, Bradley DG, Loftus BJ, Machugh DE. A complete mitochondrial genome sequence from a mesolithic wild aurochs (Bos primigenius). PLoS One. 2010 Feb 17;5(2):e9255. PMID: 20174668

Chen S, Lin BZ, Baig M, Mitra B, Lopes RJ, Santos AM, Magee DA, Azevedo M, Tarroso P, Sasazaki S, Ostrowski S, Mahgoub O, Chaudhuri TK, Zhang YP, Costa V, Royo LJ, Goyache F, Luikart G, Boivin N, Fuller DQ, Mannen H, Bradley DG, Beja-Pereira A. Zebu cattle are an exclusive legacy of the South Asia neolithic. Mol Biol Evol. 2010 Jan;27(1):1-6. PMID: 19770222


Downing T, Cormican P, O'Farrelly C, Bradley DG, Lloyd AT. Evidence of the adaptive evolution of immune genes in chicken. BMC Res Notes. 2009 Dec 15;2:254. PMID: 20003477

Kantanen J, Edwards CJ, Bradley DG, Viinalass H, Thessler S, Ivanova Z, Kiselyova T, Cinkulov M, Popov R, Stojanovic S, Ammosov I, Vilkki J. Maternal and paternal genealogy of Eurasian taurine cattle (Bos taurus). Heredity. 2009 Nov;103(5):404-15. PMID: 19603063

van Es MA, Veldink JH, Saris CG, Blauw HM, van Vught PW, Birve A, Lemmens R, Schelhaas HJ, Groen EJ, Huisman MH, van der Kooi AJ, de Visser M, Dahlberg C, Estrada K, Rivadeneira F, Hofman A, Zwarts MJ, van Doormaal PT, Rujescu D, Strengman E, Giegling I, Muglia P, Tomik B, Slowik A, Uitterlinden AG, Hendrich C, Waibel S, Meyer T, Ludolph AC, Glass JD, Purcell S, Cichon S, Nöthen MM, Wichmann HE, Schreiber S, Vermeulen SH, Kiemeney LA, Wokke JH, Cronin S, McLaughlin RL, Hardiman O, Fumoto K, Pasterkamp RJ, Meininger V, Melki J, Leigh PN, Shaw CE, Landers JE, Al-Chalabi A, Brown RH Jr, Robberecht W, Andersen PM, Ophoff RA, van den Berg LH. Genome-wide association study identifies 19p13.3 (UNC13A) and 9p21.2 as susceptibility loci for sporadic amyotrophic lateral sclerosis. Nat Genet. 2009 Oct;41(10):1083-7. PMID: 19734901

Stock F, Edwards CJ, Bollongino R, Finlay EK, Burger J, Bradley DG. Cytochrome b sequences of ancient cattle and wild ox support phylogenetic complexity in the ancient and modern bovine populations. Anim Genet. 2009 Oct;40(5):694-700. PMID: 19456314

Cormican P, Lloyd AT, Downing T, Connell SJ, Bradley D, O'Farrelly C. The avian Toll-Like receptor pathway--subtle differences amidst general conformity. Dev Comp Immunol. 2009 Sep;33(9):967-73. PMID: 19539094

Downing T, Lynn DJ, Connell S, Lloyd AT, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, Hanotte O, O'Farrelly C, Bradley DG. Evidence of balanced diversity at the chicken interleukin 4 receptor alpha chain locus. BMC Evol Biol. 2009 Jun 15;9:136. PMID: 19527513

Downing T, Lynn DJ, Connell S, Lloyd AT, Bhuiyan AK, Silva P, Naqvi AN, Sanfo R, Sow RS, Podisi B, O'Farrelly C, Hanotte O, Bradley DG. Contrasting evolution of diversity at two disease-associated chicken genes. Immunogenetics. 2009 Apr;61(4):303-14. PMID: 19247647

Bovine HapMap Consortium. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science. 2009;324(5926):528-532. PMID: 19390050

Bovine Genome Sequencing and Analysis Consortium. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science. 2009;324(5926):522-528. PMID: 19390049


Freeman AR, Lynn DJ, Murray C, Bradley DG. Detecting the effects of selection at the population level in six bovine immune genes. BMC Genet. 2008 Oct 6;9(1):62 [Epub ahead of print]. PMID:18838007

Mattiangeli V, McEvoy B, Bradley DG. Irish genetic affinities : the mosaic genome. Ir Nat J Spec Suppl. 2008; pg127-133.

Cronin S, Blauw HM, Veldink JH, van Es MA, Ophoff RA, Bradley DG, van den Berg LH, Hardiman O. Analysis of genome-wide copy number variationin Irish and Dutch ALS populations. Hum Mol Genet. 2008 Aug 21 [Epub ahead of print]. PMID:18689356

McEvoy B, Simms K, Bradley DG. Genetic investigation of the patrilineal kinship structure of early medieval Ireland. Am J Phys Anthropol. 2008 Aug;136(4):415-22. Epub 2008 Mar 18. PMID: 18350585

Cronin S, Berger S, Ding J, Schymick JC, Washecka N, Hernandez DG, Greenway MJ, Bradley DG, Traynor BJ, Hardiman O. A genome-wide association study of sporadic ALS in a homogenous Irish population. Hum Mol Genet. 2008 Mar 1;17(5):768-74. Epub 2007 Dec 5. PMID: 18057069


Larson G, Albarella U, Dobney K, Rowley-Conwy P, Schibler J, Tresset A, Vigne JD, Edwards CJ, Schlumbaum A, Dinu A, Balaçsescu A, Dolman G, Tagliacozzo A, Manaseryan N, Miracle P, Van Wijngaarden-Bakker L, Masseti M, Bradley DG, Cooper A. Ancient DNA, pig domestication, and the spread of the Neolithic into Europe. Proc Natl Acad Sci USA. 2007 Sep 25;104(39):15276-81. Epub 2007 Sep 13. PMID: 17855556

Finlay EK, Gaillard C, Vahidi SM, Mirhoseini SZ, Jianlin H, Qi XB, El-Barody MA, Baird JF, Healy BC, Bradley DG. Bayesian inference of population expansions in domestic bovines. Biol. Lett. (2007) Aug 22; 3(4):449-52. PMID: 17535790

Bauchet M, McEvoy B, Pearson LN, Quillen EE, Sarkisian T, Hovhannesyan K, Deka R, Bradley DG, Shriver MD. Measuring European population stratification with microarray genotype data. Am J Hum Genet. 2007 May;80(5):948-56. Epub 2007 Mar 22. PMID: 17436249

Edwards CJ, Bollongino R, Scheu A, Chamberlain A, Tresset A, Vigne J-D, Baird JF, Larson G, Ho SYW, Heupink TH, Shapiro B, Freeman AR, Thomas, MG, Arbogast R-M, Arndt B, Bartosiewicz L, Benecke N, Budja M, Chaix L, Choyke AM, Coqueugniot E, Döhle H-J, Göldner H, Hartz S, Helmer D, Herzig B, Hongo H, Mashkour M, Özdogan M, Pucher E, Roth G, Schade-Lindig S, Schmölcke U, Schulting R, Stephan E, Uerpmann H-P, Vörös I, Voytek, B, Bradley DG, Burger J. Mitochondrial DNA analysis shows a Near Eastern Neolithic origin for domestic cattle and no indication of domestication of European aurochs. Proc Biol Sci. 2007 Apr 3;Series B 274, 1377-1385 [Epub ahead of print] PMID: 17412685

Lynn DJ, Bradley DG. Discovery of alpha-defensins in basal mammals. Dev Comp Immunol. 2007 Mar 2 [Epub ahead of print]. PMID: 17367857

Cruz F, Bradley DG, Lynn DJ. Evidence of positive selection on the Atlantic salmon CD3gammadelta gene. Immunogenetics. 2007 Mar;59(3):225-32. Epub 2007 Jan 9. PMID: 17211637

Norton HL, Kittles RA, Parra E, McKeigue P, Mao X, Cheng K, Canfield VA, Bradley DG, McEvoy B, Shriver MD. Genetic evidence for the convergent evolution of light skin in Europeans and East Asians. Mol Biol Evol. 2007 Mar;24(3):710-22. Epub 2006 Dec 20. PMID: 17182896

Negrini R, Nijman IJ, Milanesi E, Moazami-Goudarzi K, Williams JL, Erhardt G, Dunner S, Rodellar C, Valentini A, Bradley DG, Olsaker I, Kantanen J, Ajmone-Marsan P, Lenstra JA : European Cattle Genetic Diversity Consortium. Differentiation of European cattle by AFLP fingerprinting. Anim Genet. 2007 Feb;38(1):60-6. PMID: 17257190


McEvoy B, Brady C, Moore LT, Bradley DG. The scale and nature of Viking settlement in Ireland from Y-chromosome admixture analysis. Eur J Hum Genet. 2006 Dec;14(12):1228-94. Epub 2006 Sep 6. PMID: 16957681

McGahern AM, Edwards CJ, Bower MA, Heffernan A, Park SD, Brophy PO, Bradley DG, Machugh DE, Hill EW. Mitochondrial DNA sequence diversity in extant Irish horse populations and in ancient horses. Anim Genet. 2006 Oct;37(5):498-502. PMID: 16978181

McGahern A, Bower MA, Edwards CJ, Brophy PO, Sulimova G, Zakharov I, Vizuete-Forster M, Levine M, Li S, MacHugh DE, Hill EW. Evidence for biogeographic patterning of mitochondrial DNA sequences in Eastern horse populations. Anim Genet. 2006 Oct;37(5):494-7. PMID: 16978180

Mattiangeli V, Ryan AW, McManus R, Bradley DG. A genome-wide approach to identify genetic loci with a signature of natural selection in the Irish population. Genome Biol. 2006;7(8):R74. Epub 2006 Aug 11. PMID: 16904005

Pereira F, Davis SJ, Pereira L, McEvoy B, Bradley DG, Amorim A. Genetic signatures of a Mediterranean influence in Iberian Peninsula sheep husbandry. Mol Biol Evol. 2006 Jul;23(7):1420-6. Epub 2006 May 3. PMID: 16672283

Freeman AR, Hoggart CJ, Hanotte O, Bradley DG. Assessing the relative ages of admixture in the bovine hybrid zones of Africa and the Near East using X chromosome haplotype mosaicism. Genetics. 2006 Jul;173(3):1503-10. Epub 2006 Apr 2. PMID: 16582445

Pereira L, Richards M, Goios A, Alonso A, Albarran C, Garcia O, Behar DM, Golge M, Hatina J, Al-Gazali L, Bradley DG, Macaulay V, Amorim A. Evaluating the forensic informativeness of mtDNA haplogroup H sub-typing on a Eurasian scale. Forensic Sci Int. 2006 May 25;159(1):43-50. Epub 2005 Aug 1. PMID: 16076538

Zeder MA, Emshwiller E, Smith BD, Bradley DG. Documenting domestication: the intersection of genetics and archaeology. Trends Genet. 2006 Mar;22(3):139-55. Epub 2006 Feb 3. PMID: 16458995

McEvoy B, Bradley DG. Y-chromosomes and the extent of patrilineal ancestry in Irish surnames. Hum Genet. 2006 Mar;119(1-2):212-9. Epub 2006 Jan 12. PMID: 16408222

Ryan AW, Mapp J, Moyna S, Mattiangeli V, Kelleher D, Bradley DG, McManus R. Levels of interpopulation differentiation among different functional classes of immunologically important genes. Genes Immun. 2006 Mar;7(2):179-83. PMID: 16222342

Moore LT, McEvoy B, Cape E, Simms K, Bradley DG. A y-chromosome signature of hegemony in gaelic ireland. Am J Hum Genet. 2006 Feb;78(2):334-8. Epub 2005 Dec 8. PMID: 16358217

Freeman AR, Bradley DG, Nagda S, Gibson JP, Hanotte O. Combination of multiple microsatellite data sets to investigate genetic diversity and admixture of domestic cattle. Anim Genet. 2006 Feb;37(1):1-9. PMID: 16441289

Bollongino R, Edwards CJ, Alt KW, Burger J, Bradley DG. Early history of European domestic cattle as revealed by ancient DNA. Biol. Lett. (2006) 2, 155–159. PMID: 17148352


Lister AM, Edwards CJ, Nock DA, Bunce M, van Pijlen IA, Bradley DG, Thomas MG, Barnes I. The phylogenetic position of the 'giant deer' Megaloceros giganteus. Nature. 2005 Dec 8;438(7069):850-3. Epub 2005 Sep 4. PMID: 16148942

Gotherstrom A, Anderung C, Hellborg L, Elburg R, Smith C, Bradley DG, Ellegren H. Cattle domestication in the Near East was followed by hybridization with aurochs bulls in Europe. Proc Biol Sci. 2005 Nov 22;272(1579):2345-50. PMID: 16243693

Cymbron T, Freeman AR, Isabel Malheiro M, Vigne JD, Bradley DG. Microsatellite diversity suggests different histories for Mediterranean and Northern European cattle populations. Proc Biol Sci. 2005 Sep 7;272(1574):1837-43. PMID: 16096097

McEvoy B, Edwards CJ. Human migration: reappraising the Viking image. Heredity. 2005 Aug;95(2):111-2. PMID: 15931243

Pereira F, Pereira L, Van Asch B, Bradley DG, Amorim A. The mtDNA catalogue of all Portuguese autochthonous goat (Capra hircus) breeds: high diversity of female lineages at the western fringe of European distribution. Mol Ecol. 2005 Jul;14(8):2313-8. PMID: 15969716

Lynn DJ, Freeman AR, Murray CU, Bradley DG. A Genomics Approach to the Detection of Positive Selection in Cattle : Adaptive Evolution of the T Cell and NK Cell Surface Protein, CD2. Genetics 2005 Jul;170(3):1189-96. Epub 2005 Mar 31. PMID: 15802510


McEvoy B, Richards M, Forster P, Bradley DG. The Longue Duree of genetic ancestry: multiple genetic marker systems and Celtic origins on the Atlantic facade of Europe. Am J Hum Genet. 2004 Oct;75(4):693-702. Epub 2004 Aug 12. PMID: 15309688

Edwards CJ, MacHugh DE, Dobney KM, Martin L, Russell N, Horwitz LK, McIntosh SK, MacDonald KC, Helmer D, Tresset A, Vigne J-D, Bradley DG. Ancient DNA analysis of 101 cattle remains: limits and prospects. Journal of Archaeological Science 31, 695-710.

Freeman AR, Meghan CM, MacHugh DE, Loftus RT, Achukwi MD, Bado A, Sauveroche B, Bradley DG. Admixture and diversity in West African cattle populations. Mol Ecol. 2004 Nov;13(11):3477-87. PMID: 15488005

Mannen H, Kohno M, Nagata Y, Tsuji S, Bradley DG, Yeo JS, Nyamsamba D, Zagdsuren Y, Yokohama M, Nomura K, Amano T. Independent mitochondrial origin and historical genetic differentiation in North Eastern Asian cattle. Mol Phylogenet Evol. 2004 Aug;32(2):539-44. PMID: 15223036

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